Bacteria

domain of micro-organisms

Bacteria (singular: bacterium) are very small organisms. They are prokaryotic microorganisms. Bacterial cells do not have a nucleus, and most have no organelles with membranes around them. Most have a cell wall. They do have DNA, and their biochemistry is basically the same as other living things. They are amongst the simplest and the oldest organisms.

Bacteria
Temporal range: Archean or earlier – present
EscherichiaColi NIAID.jpg
Scanning electron micrograph of Escherichia coli rods
Scientific classification e
Domain: Bacteria
Woese, Kandler & Wheelis, 1990
Phyla

Actinobacteria (high-G+C)
Firmicutes (low-G+C)
Tenericutes (no wall)

Aquificae
Bacteroidetes/FibrobacteresChlorobi (FCB group)
Chlamydiae
Deinococcus-Thermus
Fusobacteria
Gemmatimonadetes
Nitrospirae
PlanctomycetesVerrucomicrobia/Chlamydiae (PVC group)
Proteobacteria
Spirochaetes
Synergistetes

  • Unknown/ungrouped

Acidobacteria
Chloroflexi
Chrysiogenetes
Cyanobacteria
Deferribacteres
Dictyoglomi
Thermodesulfobacteria
Thermotogae

Synonyms

Eubacteria Woese & Fox, 1977

Almost all bacteria are so tiny they can only be seen through a microscope. Bacteria are made up of one cell, so they are a kind of unicellular organism. They were one of the earliest forms of life, and are simple single-celled organisms. They include extremophiles, which live in extreme habitats.

There are probably more individual bacteria than any other sort of organism on the planet, except viruses.[1] Most bacteria live in the ground or in water, but many live inside or on the skin of other organisms, including humans. There are about as many bacterial cells as human cells in each of our bodies.[2][3] Some bacteria cause diseases, but others help us in everyday activities like digesting food (gut flora). Some we use in factories to make cheese and yogurt.

The founder of bacteriology was a German biologist called Ferdinand Cohn (1828–1898). He published the first biological classification of bacteria, based on their appearance.[4]

Reproduction and gene transferEdit

A bacterium reproduces (creates more bacteria) by dividing in half and creating two "daughter" cells. Each daughter is identical in shape to the parent.

Bacteria do not have sexes, but they do transmit DNA by several kinds of horizontal gene transfer. This is how they share resistance to antibiotics from one strain to another. The complete DNA sequence is known for many bacterial strains. Each bacterium has only one chromosome.[5]

ShapeEdit

Bacteria vary widely in size and shape, but in general they are at least ten times larger than viruses. A typical bacterium is about 1 µm (one micrometer) in diameter, so a thousand bacteria lined up would be one millimeter long. There are about five nonillion (5×1030) bacteria on Earth.[1]

Bacteria are identified and grouped by their shapes. Bacilli are rod-shaped, cocci are ball-shaped, spirilla are spiral-shaped, and vibrio are shaped like a comma or a boomerang.

 
Different shapes of bacteria

PathogensEdit

Pathogenic bacteria, the harmful kind, enter the human body from the air, water or food. Once inside, these bacteria attach themselves to or invade specific cells in our respiratory system, digestive tract or in any open wound. There they begin to reproduce and spread while using your body's food and nutrients to give them energy to help them reproduce.

ExtremophilesEdit

Some bacteria are extremophiles. Some microbes thrive inside rocks up to 580 meters below the sea floor under 2.6 kilometers of ocean off the Pacific Northwest of the United States.[6][7] According to one of the researchers, "You can find microbes everywhere — they're extremely adaptable to conditions, and survive wherever they are."[6]

VirusesEdit

Viruses were the first and are the most serious enemies of bacteria. Everywhere bacteria are, they get attacked by viruses. The viruses which attack bacteria are called bacteriophages.

Something is now known about how bacteria protect themselves against viruses. Most bacteria have CRISPR–Cas systems as an adaptive defence against viruses. These keep sections of viral DNA. These are used to target and destroy later infections by the virus. The process is similar to RNA interference.[8]

History of their classificationEdit

All modern ideas start with the sequence analysis of DNA and RNA. In 1987, Carl Woese, the forerunner of the molecular phylogeny revolution, divided bacteria into 11 divisions based on 16S ribosomal RNA (SSU) sequences:[9][10]

  • Proteobacteria: Purple bacteria and their relatives
    Alpha subdivision: purple non-sulfur bacteria, rhizobacteria, Agrobacterium, Bartonella, Rickettsiae, Nitrobacter)
    Beta subdivision: (Rhodocyclus, (some) Thiobacillus, Alcaligenes, Spirillum, Nitrosovibrio
    Gamma subdivision: enterics, fluorescent pseudomonads, purple sulfur bacteria, Legionella, (some) Beggiatoa
    Delta subdivision: Sulfur and sulfate reducers (Desulfovibrio), Myxobacteria, Bdellovibrio
  • Gram-positive Eubacteria
    High-G+C species - Actinobacteria (Actinomyces, Streptomyces, Arthrobacter, Micrococcus, Bifidobacterium)
    Low-G+C species - Firmicutes (Clostridium, Peptococcus, Bacillus, Mycoplasma)
    Photosynthetic species (Heliobacterium)
    Species with gram-negative walls (Megasphaera, Sporomusa)
    Cyanobacteria and chloroplasts (Aphanocapsa, Oscillatoria, Nostoc, Synechococcus, Gleoebacter, Prochloron)
  • Spirochaetes and relatives
    Spirochetes (Spirochaeta, Treponema, Borrelia)
    Leptospiras (Leptospira, Leptonema)
  • Green sulfur bacteria (Chlorobium, Chloroherpeton)
  • Bacteroides, Flavobacteria and relatives
    Bacteroides (Bacteroides, Fusobacterium)
    Flavobacterium group (Flavobacterium, Cytophaga, Saprospira, Flexibacter)
  • Planctomyces and relatives
    Planctomyces group (Planctomyces, Pasteuria)
    Thermophiles (Isocystis pallida)
  • Chlamydiae (Chlamydia psittaci, Chlamydia trachomatis)
  • Radioresistant micrococci and relatives
    Deinococcus group (Deinococcus radiodurans)
    Thermophiles (Thermus aquaticus)
  • Green non-sulfur bacteria and relatives
    Chloroflexus group (Chloroflexus, Herpetosiphon)
    Thermomicrobium group (Thermomicrobium roseum)
  • Thermotogae

Related pagesEdit

ReferencesEdit

  1. 1.0 1.1 Whitman W, Coleman D, Wiebe W (1998). "Prokaryotes: the unseen majority". Proc Natl Acad Sci USA. 95 (12): 6578–83. Bibcode:1998PNAS...95.6578W. doi:10.1073/pnas.95.12.6578. PMC 33863. PMID 9618454.{{cite journal}}: CS1 maint: multiple names: authors list (link)
  2. Crew, Bec. "Here's how many cells in your body aren't actually human". ScienceAlert. Retrieved 2019-08-07.
  3. Yong, Ed (2016-01-08). "You're probably not mostly microbes". The Atlantic. Retrieved 2019-08-07.
  4. Encyclopedia Britanniaca: Bacteriology
  5. "Bacterial DNA – the role of plasmids".
  6. 6.0 6.1 Choi, Charles Q. (2013). "Microbes thrive in deepest spot on Earth". LiveScience. Retrieved 17 March 2013.
  7. Oskin, Becky (2013). "Intraterrestrials: Life thrives in ocean floor". LiveScience. Retrieved 17 March 2013.
  8. van der Oost J, Westra ER, Jackson RN, Wiedenheft B (July 2014). "Unravelling the structural and mechanistic basis of CRISPR-Cas systems". Nature Reviews. Microbiology. 12 (7): 479–92. doi:10.1038/nrmicro3279. PMC 4225775. PMID 24909109.
  9. Woese C.R. 1987. Bacterial evolution. Microbiological reviews 51 (2): 221–71. [1]
  10. Holland L. (1990). "Woese, Carl in the forefront of bacterial evolution revolution". Scientist. 3 (10).