Halophile
Halophiles are organisms that need salt in their environment to live. Halophiles live in evaporation ponds or salt lakes such as Great Salt Lake, Owens Lake, or Dead Sea.[1] The name "halophile" comes from Greek for "salt-loving".[2]
Most halophiles are archaeans, but some bacteria and eukaryotes are also halophiles, such as the alga Dunaliella salina.[3]
Lifestyle
changeMost halophilic and salt-eating animals use energy to remove salt from their cytoplasm.[4] Normally, organisms living around a lot of salt would lose water and die because of osmosis.[1][5][6][7] Water inside the organism would move from inside the cell to its outside environment. This is because there is always movement of water to reach a state where the concentrations of salt are the same on both sides of the cell membrane.
To survive, the cytoplasm of halophiles must be isotonic with its environment.[8]
To get to this state, halophiles use two different methods. In the first (mainly used by bacteria, some archaea, yeasts, algae and fungi), organic compounds are stored in the cytoplasm. These compounds help the organism survive the stress of osmosis.[9][10] The most commonly used solutes for this process are neutral and include amino acids and sugars.[7][11][12] Advantages to this method are that organisms can live in a wider range of salt concentrations. Also, if proteins are not exposed to high salt levels, they do not have to adapt to high salt levels. It requires the organism to use much more energy then the adaption below.[4]
The second, less common adaptation, is the selective intake of potassium (K+) ions into the cytoplasm. In exchange, the organism pumps sodium (Na+) ions out with the help of the sodium-potassium pump.[12] Ions of sodium may be used instead of potassium, but potassium is the most common.[7] This adaptation is only used by one order of bacteria and one family of Archaea.[13] An advantage to this method is that it uses much less energy than the adaption above. The main disadvantage to this adaption is that all of the machinery inside the cell (enzymes, structural proteins, etc.) must be adapted to high levels of non-organic ions,[13] and high salt levels.[4] This is much more demanding than the adaptation described above.
Most halophilic organisms only use one of the two methods, but a few halophiles can use both.[14]
Categorization
changeHalophiles are categorized by the levels of salt at which they grow best. Halophiles can either be categorized as slight halophiles, moderate halophiles, or extreme halophiles.[15] Slight halophiles grow best in concentrations of salt around 2% to 5%. An example of a slight halophile is Erythrobacter flavus.[16] Slight halophiles live in mud on the ocean floor, in seawater, and in garden soil.[17]
Moderate halophiles grow best in concentrations of salt around 5% to 20%. Examples of moderate halophiles are organisms in the genera Desulfovibrio, Desulfocella, Desulfohalobium, and Desulfotomaculum. Moderate halophiles live in marine salterns, saline lakes, in matter at the bottom of the sea, and in oil brine fields.[18]
Extreme halophiles grow best in concentrations of salt from 20% to 30%. Examples of extreme halophiles are Salinibacter ruber and organisms in the Halobacteria class. Extreme halophiles live in the Dead Sea in the Middle East and in man-made solar salterns (lakes used for making sea salt).
Importance and uses
changeIn nature
change
Halophiles play an important part in ecosystems. For example, halophiles often support entire populations of wild birds.
Halophiles are useful for cleaning up polluted environments.[19] Waste water with salt concentrations more than 2% is ideal for halophiles to remove organic pollutants from.[20] For instance, halophiles have been shown to remove phenol (a poisonous chemical) from their environments. This could lead to future use in cleaning up oil spills.[21]
In fermentation
changeHalophiles play an important part in the fermentation of some foods. For instance, halophiles ferment soy and fish sauces.[22] Halophiles also ferment salted fish.
In biotechnology
changeHalophilic microorganisms are useful in biotechnology. The compounds that certain halophiles make are valuable. Some of these compounds are not found anywhere else in the living world.[23] The salt-tolerant enzymes that halophiles produce can be used in a variety of ways.[24] For example, these enzymes could be used for rough industrial processes, like food processing.[19]
Some moderate halophiles produce sugars outside the cell. These sugars can be used as thickeners and emulsifiers in the petroleum and medicine industries.[25]
Related pages
changeReferences
change- ↑ 1.0 1.1 Gilmour & Sephton 2004, p. 78
- ↑ Gordh, George; Gordh, Gordon; Headrick, David (2003). A Dictionary of Entomology. CABI Publishing. p. 425. ISBN 0851996558. Retrieved 5 December 2010.
- ↑ Oren 2002, p. 23
- ↑ 4.0 4.1 4.2 Siddiqui & Thomas 2008, p. 73
- ↑ Siddiqui & Thomas 2008, p. 72
- ↑ Arora, Madhu (1998). Biological Control Of Environmental Pollution (Set Of 3 Volumes). Anmol Publications Pvt Ltd. p. 736. ISBN 8174889493. Retrieved 10 December 2010.[permanent dead link]
- ↑ 7.0 7.1 7.2 Cavicchioli, Ricardo (2007). Archaea: molecular and cellular biology. ASM Press. p. 32. ISBN 978-1555813918. Retrieved 19 December 2010.
- ↑ Oren, Aharon (1998). Microbiology and biogeochemistry of hypersaline environments. CRC Press. p. 5. ISBN 0849383633. Retrieved 20 January 2011.
- ↑ Gilmour & Sephton 2004, p. 79
- ↑ Santos H. and da Costa M.S. 2002. Compatible solutes of organisms that live in hot saline environments. Environmental Microbiology 4: 501–509.
- ↑ Fraser, Claire M.; Read, Timothy D.; Nelson, Karen E. (2004). Microbial genomes. Humana Press. p. 383. ISBN 1588291898. Retrieved 10 December 2010.[permanent dead link]
- ↑ 12.0 12.1 Stolp 1988, p. 139
- ↑ 13.0 13.1 Oren 2002, p. 279
- ↑ Siddiqui & Thomas 2008, pp. 72–73
- ↑ Mishra, C.S.K.; Pascale Champagne (2009). Biotechnology Applications. I K International Publishing House. p. 288. ISBN 978-9380026299. Retrieved 11 December 2010.
- ↑ Yoon JH (2003). "Erythrobacter flavus sp. nov., a slight halophile from the East Sea in Korea". International Journal of Systematic and Evolutionary Microbiology. 53 (Pt 4): 1169–1174. doi:10.1099/ijs.0.02510-0. PMID 12892146. Retrieved 14 December 2010.
- ↑ Vreeland, Russell H.; Hochstein, Lawrence I. (1992). The Biology of halophilic bacteria. CRC Press. p. 89. ISBN 0849388414. Retrieved 13 December 2010.
- ↑ Seckbach, Joseph (2001). Journey to diverse microbial worlds: adaptation to exotic environments. Springer. p. 86. ISBN 0792360206. Retrieved 13 December 2010.
- ↑ 19.0 19.1 Dion 2007, p. 101
- ↑ Kargi, F.; Dinçer, A.R. (2000). "Use of Halophilic Bacteria in Biological Treatment of Saline Wastewater by Fed-Batch Operation". Water Environment Research. 72 (2). Journal Storage: 170–174. doi:10.2175/106143000X137248. JSTOR 25045354. S2CID 100080392. Retrieved 24 January 2011.
- ↑ Surampalli, Rao Y. (2004). Advances in water and wastewater treatment. American Society of Civil Engineers. p. 168. ISBN 078440741X. Retrieved 24 January 2011.
- ↑ DasSarma, Shiladitya; Arora, Priya. "Halophiles" (PDF). University of Massachusetts. p. 8. Archived from the original (PDF) on 12 August 2011. Retrieved 27 January 2011.
- ↑ Oren 2002, p. 357
- ↑ Lorence, Argelia (2004). Recombinant gene expression: reviews and protocols. Humana Press. p. 184. ISBN 1588292622. Retrieved 17 December 2010.
- ↑ Dion 2007, p. 103
Sources
change- Gilmour, Iain; Sephton, Mark A. (2004). An introduction to astrobiology. Cambridge University Press. ISBN 0521837367. Retrieved 5 December 2010.
- Oren, Aharon (2002). Halophilic microorganisms and their environments. Springer. ISBN 1402008295. Retrieved 7 December 2010.
- Stolp, Heinz (1988). Microbial ecology: organisms, habitats, activities. Cambridge University Press. ISBN 0521276365. Retrieved 11 December 2010.
- Siddiqui, Khawar Sohail; Thomas, Torsten (2008). Protein adaptation in extremophiles. Nova Science Publishers. ISBN 978-1604560190. Retrieved 11 December 2010.
- Dion, Patrice (2007). Chandra Shekhar Nautiyal (ed.). Microbiology of extreme soils. Springer. ISBN 978-3540742302. Retrieved 18 December 2010.